* refactor(tools): implement strict cohesive class coordinator pattern per #2917
* test: update edit_file tests to use EditFileTool class
* fix(tools): restore tool_policy param and security backstop in coordinator
* refactor(tools): migrate domain tools to agent_tools package per #2917
* test: update test imports for new agent_tools package
* fix: resolve circular import between tool_execution and agent_tools
* fix: remove leftover git conflict markers
* fix(tools): resolve pytest failure and document _apply method
* fix(tools): clean up whitespace and remove dead _tool_python helper
---------
Co-authored-by: Alexandre Teixeira <111787685+alteixeira20@users.noreply.github.com>
Commit e6b1009 removed the workspace feature's entry point (deleted
routes/workspace_routes.py + static/js/workspace.js and dropped the
workspace-param parsing in chat_routes), but left the downstream backend
plumbing dangling: chat_routes passed a hardcoded workspace=None into
stream_agent_loop, which forwarded it to execute_tool_block, so the
workspace value was permanently None and every workspace-gated branch
was unreachable.
Remove the now-dead code (no behavior change, since workspace was always
None):
- src/tool_execution.py: drop _resolve_tool_path_in_workspace and the
workspace params/branches on execute_tool_block, _direct_fallback,
_call_mcp_tool, _do_edit_file, and _resolve_search_root; restore the
bash/python/bg cwd to _AGENT_WORKDIR.
- src/agent_loop.py: drop the workspace param on stream_agent_loop, the
dead 'ACTIVE WORKSPACE' system-prompt block, and the workspace forward.
- routes/chat_routes.py: drop the hardcoded workspace=None arg and var.
- tests: delete test_workspace_confine.py (tested the removed feature) and
the workspace assertion in test_tool_policy.py.
Full suite: 2903 passed, 1 skipped.
* refactor(tools): consolidate duplicated _truncate and get_mcp_manager into src/tool_utils
Move all copies of _truncate(), get_mcp_manager(), and set_mcp_manager()
into a single leaf module (src/tool_utils.py) that imports only from
src.constants. This eliminates the lazy-import hack
('from src import agent_tools' inside function bodies) in tool_execution.py
and tool_implementations.py, and fixes a latent bug: the _truncate copy in
tool_execution.py was missing the isinstance guard and would crash on None.
Also deletes mcp_servers/_common.py — it was dead code with zero callers
anywhere in the codebase, containing its own copy of truncate() and
constants that already exist in src/constants.py.
* fix(tools): route remaining get_mcp_manager imports to src.tool_utils
The maintainer's feedback flagged src/task_scheduler.py:1857 and
routes/task_routes.py:977. A project-wide search found a third call site
in src/agent_loop.py that also imported get_mcp_manager from
src.agent_tools instead of src.tool_utils.
All three are now sourced from the canonical location in src.tool_utils.
---------
Co-authored-by: mcnoliveira <mcnoliveira@gmail.com>
* refactor(constants): single source of truth for data dir + merge core/src constants
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs(contributing): use named src.constants for data paths, drop core/constants references
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
MAX_OUTPUT_CHARS, MAX_READ_CHARS, and MAX_DIFF_LINES are now
defined once in src/constants.py and imported by the three files
that previously duplicated them (tool_execution.py,
tool_implementations.py, agent_tools.py). agent_tools.py re-exports
them for backward compatibility.
Co-authored-by: mcnoliveira <mcnoliveira@gmail.com>
* feat: Add plan mode to the chat agent
Adds a plan mode: the agent investigates read-only, proposes a checklist, and
waits for approval before changing anything. On approval it runs with full
tools and checks items off as it goes. Enforcement reuses the existing
disabled_tools gate.
Includes a slash command: `/plan [on|off]` (and `/toggle plan`) to flip the
plan toggle from the chat input.
- src/tool_security.py, src/mcp_manager.py: read-only allowlist (tools + MCP).
- src/agent_loop.py, routes/chat_routes.py: union the disabled set, prepend the
plan directive, force agent mode.
- static/: plan toggle pill, Approve & Run, dockable plan window, task-list
checkboxes, and the /plan slash command.
- tests/test_plan_mode.py.
* Plan mode: persistent re-referenceable plan + agent write-back
Three improvements so a long plan survives a weak model and stays in reach:
1. Re-reference the plan (out-of-context fix). On the execution turn the frontend
sends the approved checklist back (`approved_plan`); the backend pins it as a
top-of-context `## ACTIVE PLAN` system note (kept by the context trimmer), so
the agent can always re-read the plan instead of losing the thread on a long
run. New `build_active_plan_note()` (unit-tested).
2. Re-open / dock the plan anytime. The plan checklist is stored per-session
(localStorage). When a plan exists, the plan-mode button opens a small menu
("Show plan" / "Plan mode: On/Off") that re-opens the side-dockable plan
window — so it can stay docked while the agent works. The window live-refreshes
as the plan changes.
3. Agent write-back: new `update_plan` tool. The agent calls it to tick steps
`- [x]` after finishing them, or to revise steps when the user asks. Marker
tool (no I/O) → `plan_update` SSE event → the stored plan + docked window
update live. The ACTIVE PLAN note instructs the agent to use it.
Backend: src/agent_loop.py (param + pin + note builder + emit + prompt blurb),
src/tool_execution.py (update_plan handler), routes/chat_routes.py (parse
`approved_plan`, relay `plan_update`), registration in tool_schemas / agent_tools
/ tool_index (always-available, not admin-gated).
Frontend: static/js/chat.js (plan store, send `approved_plan`, handle
`plan_update`, capture restated checklists), static/app.js (plan-button menu),
static/js/planWindow.js (`isPlanWindowOpen`), static/js/storage.js (PLAN key).
Tests: tests/test_plan_mode.py (plan-note), tests/test_update_plan_tool.py.
* Plan mode: drop bash/python, rely on read-only discovery tools
Shell can mutate (write files, hit the network) and can't be constrained to
read-only at the tool layer, so plan mode no longer relies on a prompt to keep
it well-behaved — bash/python are removed from the read-only allowlist and added
to the fail-closed block set. Discovery is covered by the dedicated read-only
tools (read_file, grep, glob, ls) instead.
Rewrites the plan-mode directive to state shell is disabled and lists the
available read-only tools positively. Addresses review feedback on #638.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
* Comment: note _MCP_READONLY_VERBS are prefixes not whole words
Clarifies that entries like "summar" are intentional stems matched via
startswith (covers summarise/summarize/summary), not typos. Addresses review
feedback on #638.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
* Plan mode: clarify why gating inverts the allowlist into a denylist
Rename _PLAN_MODE_FALLBACK_BLOCK -> _PLAN_MODE_KNOWN_MUTATORS and rewrite the
comments. The tool gate is a denylist (disabled_tools); plan mode's policy is an
allowlist, so it returns the inverse (all known tool names minus the allowlist).
The static mutator set is a backstop for the schema-derived name list, which
misses XML-only tools and can fail to import. Addresses review feedback on #638.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
* Plan mode: stop hardcoding the read-only tool list in the directive
The model is already shown its available (read-only) tools by _assemble_prompt,
which removes every disabled tool. Enumerating them again in the directive only
duplicated that list and would drift as tools change. Point at the tools listed
below instead. Addresses review feedback on #638.
* fix(images): render agent-generated images in chat
When a chat model calls generate_image mid-conversation (agentic flow), the image does
not display — it survives only as a URL the model echoes in prose. generate_image runs
as a text-only MCP server, so result['image_url'] is never populated and the existing
buildImageBubble render path never fires. Promote the image URL out of the tool's stdout
in tool_execution so the agent loop's existing forwarding renders it via buildImageBubble
— deterministically, no dependence on the model echoing the URL. Backend-only; reuses
dev's image bubble, forwarding, and the tool's existing parseable output.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* feat(images): fully-qualified, valid generated-image links
The chat model often mangled the generated-image URL it echoed in prose (relative path,
or copying the 'image_url:' label into the link href). Build a fully-qualified link by
prefixing the existing app_public_url setting (empty default keeps relative paths), and
present it as a clean 'Direct link:' the model can echo verbatim (the frontend auto-links
bare https URLs). One file; independent of how the image is rendered.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* test(images): cover _promote_image_fields; make exit-code guard self-contained
Adds the unit tests requested in review on #2809: absolute URL, relative URL,
no URL (result unchanged), and non-zero exit_code (not promoted). Moves the
dict/exit_code==0 guard from the call site into _promote_image_fields so the
function is self-contained and the failure case is unit-testable; call-site
behavior is unchanged.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Let the agent pause and ask the user a multiple-choice question when a
task is genuinely ambiguous and the answer changes what it does next —
choosing between approaches, confirming an assumption, picking a target —
instead of guessing.
Modeled on the existing `ui_control` marker pattern: the `ask_user` tool
returns an `ask_user` payload that the agent loop emits as an SSE event
and then ends the turn. The frontend renders the question with clickable
option buttons, a free-text "Other" input, and an x to dismiss; the user's
choice is sent as the next message and the agent resumes with it in
context.
- src/tool_execution.py: `ask_user` handler — pure UI marker, no I/O.
Validates a non-empty question + 2..6 options, normalizes string/object
options, returns the payload.
- src/agent_loop.py: emit the `ask_user` event and break the round loop so
the turn ends and waits for the user's selection. Stream the question as
assistant text so it persists/replays (prevents a re-ask loop).
- Registration: TOOL_TAGS, ALWAYS_AVAILABLE, BUILTIN_TOOL_DESCRIPTIONS,
FUNCTION_TOOL_SCHEMAS, the system-prompt blurb. Not admin-gated (any
user can be asked); the structured args serialize via the default
json.dumps path.
- routes/chat_routes.py: relay the `ask_user` event to the client.
- static/js/chat.js + static/style.css: render the question card (options +
free-text Other + dismiss x; removed once answered). Reuses CSS vars and
the .modal-close button; emoji go through the monochrome-SVG pipeline.
Bump chat.js cache pin.
- tests/test_ask_user_tool.py: payload, multi flag, string options, option
cap, validation errors, serializer round-trip, registration.
* feat: Add workspace: confine agent tools to a folder
Pick a server folder as the agent's workspace so its file/shell tools work
there and don't touch files outside it. File tools are hard-confined; bash/
python run with cwd set to the folder.
Includes a slash command: `/workspace` (alias `/ws`) — show / `set <path>` /
`clear` / `pick` (open the directory browser).
- routes/workspace_routes.py: GET /api/workspace/browse (admin-only).
- src/tool_execution.py: hard path confinement for read_file/write_file;
bash/python cwd. Threaded route → stream_agent_loop → execute_tool_block.
- src/agent_loop.py: workspace note prepended to the system prompt.
- static/: overflow menu item, input-bar pill, directory-browser modal, and
the /workspace slash command.
- tests/test_workspace_confine.py.
* Wire workspace confinement into tools that landed after this PR
edit_file (#1239) and grep/glob/ls (#1670) merged after workspace-confine was
written, so they bypassed the workspace boundary. Thread the workspace through:
- edit_file: _do_edit_file resolves via _resolve_tool_path_in_workspace
- grep/glob/ls: _resolve_search_root confines to the workspace (root + paths)
- bash/python/bg cwd: workspace or _AGENT_WORKDIR (keep the #2586 data-dir
default when no workspace is set)
Tests cover edit_file + grep/ls confinement (inside ok, outside rejected).
* Workspace picker: editable path bar + modal style cohesion + cross-platform hardening
- Make the current-folder strip an editable address bar: type/paste a full
path and press Enter to navigate (also reaches other Windows drives and
hidden dirs the up-only browser cannot).
- Reuse shared modal CSS: drop bespoke .workspace-modal-content/.workspace-btn*
in favour of base .modal-content/.modal-body and the .confirm-btn button
family; separators/hover use var(--border). Net -31 CSS lines.
- Fix the path field overflowing the modal right edge (flex stretch + margin
vs an overflow:auto scrollbar-feedback loop): full-bleed, no h-margin.
- Cross-platform confinement: normcase the workspace commonpath check so
containment holds on case-insensitive filesystems (Windows/macOS).
- Make tests OS-portable: sibling temp dirs instead of /etc, python os.getcwd()
instead of pwd. 5 pass.
Agent subprocesses (bash, python) previously inherited the container's default
working directory (/app), so files created with relative paths landed in the
ephemeral container layer and were silently destroyed on any docker compose up
--build or container recreation.
Set cwd=_AGENT_WORKDIR (resolved to <repo_root>/data at import time) and
HOME=_AGENT_WORKDIR on both subprocess launchers so that:
- pwd inside a bash tool returns the persistent data directory
- relative paths and ~ resolve to a location that survives rebuilds
- the agent can still cd to any absolute path it needs
The resolution uses pathlib.Path(__file__).parent.parent / "data", which
works for both Docker (/app/src → /app/data) and manual installs
(<repo>/src → <repo>/data) without requiring a new env var or compose change.
Fixes#2512
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
Gives the agent first-class code navigation instead of shelling out via bash
(token-heavy, unreliable on weaker models, unstructured). Mirrors the
Grep/Glob/Read primitives that Claude Code / opencode expose.
- grep: regex search over file contents across a tree. Uses ripgrep when
available (with explicit excludes so junk dirs are skipped even without a
.gitignore); falls back to a pure-Python walk+regex when rg is absent.
Returns file:line:match, capped.
- glob: find files by glob pattern (recursive), newest first.
- ls: list a directory (folders first, then files with sizes).
- read_file: optional offset/limit for line-range reads of large files
(plain-path calls stay back-compatible).
All confined by the same path policy as read_file (_resolve_tool_path:
data/tmp allowlist + sensitive-file deny). Junk dirs (.git, node_modules,
venv, __pycache__, dist/build, …) skipped. Output capped (200 hits,
400 chars/line). Admin-gated like the other filesystem tools.
Wiring: schemas + native arg->content serializer (src/tool_schemas.py), tool
tags (src/agent_tools.py), always-available + descriptions (src/tool_index.py),
admin gate (src/tool_security.py), dispatch + impls (src/tool_execution.py).
Tests: tests/test_code_nav_tools.py — match/skip-junk/ignore-case/glob-filter,
allowlist rejection, glob/ls, read-range, and the no-ripgrep Python fallback.
* Add edit_file tool + file-change diffs
edit_file is an exact old_string -> new_string replacement on a file on disk
(fails if old_string is missing or non-unique unless replace_all); write_file
also returns a unified diff. Diffs render collapsed in the tool bubble
(filename + +adds/-dels, theme colors); the raw JSON command box is hidden.
Security: edit_file is a sensitive filesystem-write tool, treated everywhere
write_file is —
- added to NON_ADMIN_BLOCKED_TOOLS (is_public_blocked_tool / blocked_tools_for_owner),
so on auth-enabled deployments a non-admin cannot run it; execute_tool_block
refuses it for non-admin owners.
- confined by the same path policy as read_file/write_file (allowlist +
sensitive-file deny) via _resolve_tool_path.
Disambiguation in tool descriptions + bash prompt: edit_file/write_file are the
only way to write files (they show a diff) — never edit_document (editor panel)
or a bash heredoc/redirect.
Tests (tests/test_edit_file.py): non-admin block (policy + execution gate),
successful edit, not-found old_string, non-unique old_string (+ replace_all),
and path outside the allowed roots.
Files: src/tool_execution.py, src/agent_loop.py, src/tool_schemas.py,
src/agent_tools.py, src/tool_index.py, static/js/chat.js, static/style.css,
tests/test_edit_file.py.
* Drop redundant import os in write_file closure
os is already imported at module top.
Three converging fixes so the chat agent + external Codex/Claude skills can actually debug a crashed serve instead of staring at a post-crash neofetch banner:
* Serves now `tee` to /tmp/odysseus-tmux/SESSION.log on the host running them. Runner saves fds 3/4 before the tee and restores them right before `exec ${SHELL}`, so the post-crash interactive zsh banner does NOT pollute the log file.
* `tail_serve_output` (chat agent) and `/api/codex/cookbook/output/{sid}` (Codex+Claude skills) both prefer the persistent log file over the tmux pane. Pane is fallback for sessions predating the tee runner. Default tail bumped 150 -> 400.
* `list_served_models` "recent log" snippet seeks to the Traceback line instead of showing the last 6 lines (which was always the bash prompt).
Cookbook auto-adoption sweep on `/api/cookbook/tasks/status`: every 20s (rate-limited) the cookbook SSHes each configured server, finds `serve-*` / `cookbook-*` tmux sessions running an actual model process (vllm/python/llama-server/etc., filtered via `pane_current_command`), and writes them into state.tasks. So when the agent falls back to raw ssh+tmux, the session appears in the Cookbook UI on the next poll.
`serve_model` error path now reads `data["detail"]` in addition to `data["error"]` so the FastAPI HTTPException message ("Invalid characters in cmd") actually reaches the agent instead of being swallowed as a generic "Serve failed". Tool description updated to warn against `cd …`/`source …`/`&&` prefixes.
Intent-without-action supervisor in agent_loop: when the model writes "Let me tail the output" / "I'll check the logs" / "Let me investigate" and ends the turn without emitting a tool call, the loop injects a sharp system nudge ("You said you would X — DO IT NOW") and continues. Capped at 2 nudges per chat so a model that genuinely cannot use the tool does not pin the loop.
Codex/Claude skill parity: adds `/cookbook/cached`, `/cookbook/presets`, `/cookbook/preset/{name}`, `/cookbook/adopt` so external agents have the same surface as the chat agent. SKILL.md docs + odysseus_api.py wrapper updated for both bundles.
`adopt_served_model` promoted to the always-on tool set so the agent has a documented fallback when serve_model rejects a cmd.
Also various cookbook UI tweaks accumulated alongside the above (cookbook.js, cookbookRunning.js, cookbookServe.js, cookbook-diagnosis.js, settings.js, style.css).
Rework read_file / write_file confinement after review feedback:
- Remove $HOME from default allow roots. Only project data/ and system
temp dirs are allowed out of the box.
- Add a sensitive-subpath deny list (.ssh, .gnupg, shell rc files,
.env, .netrc, SSH key filenames). Checked BEFORE allowlist so it
blocks even when a broader root is configured.
- Add "tool_path_extra_roots" setting for opt-in broader access.
- Sensitive subpaths remain blocked regardless of configured roots.
Tests: 24 cases covering /etc/shadow, ~/.ssh/authorized_keys,
symlink into .ssh, traversal, shell rc files, key filenames,
extra roots, and dispatch-level end-to-end.
Models (notably Gemini) emit a native 'google_search' function call, but the
agent loop had no mapping for it, so the call failed to convert, the round
produced 0 chars and 0 tool blocks, and generation died silently — the web
client hung on 'waiting for first token' with no error (also #443).
- Map google_search / google_search_retrieval / google_search_grounding to the
web_search tool, and read Gemini's 'queries' array (falling back to 'query').
- In stream_agent_loop, when a round yields no response text and no tool
events, emit a visible fallback message instead of leaving the user hanging.
- Give the unknown-tool execution branch an explicit exit_code=1 so the failure
is logged as an error rather than 'n/a'.
Unknown/unconvertible tool names still return None (unchanged) so they are
dropped safely rather than executed. Added tests covering the google_search
mapping, the queries array, and unknown/invalid-JSON returning None.
read_file/write_file passed the raw path to open(), so a tilde path like
~/notes.txt failed ("not found") — the shell's ~ expansion never happened
because there's no shell. Agents then fell back to bash to reach home-dir
files. Expand ~ (and ~user) with os.path.expanduser before opening.
Checks: python -m py_compile src/tool_execution.py.
* feat(web-fetch): add web_fetch tool to read a specific URL's content
* test(web-fetch): add SSRF coverage and fail closed on empty DNS resolution
Add explicit SSRF regression tests for the web_fetch path covering
loopback, private LAN ranges, link-local/metadata, IPv6 private/local,
redirect-into-private, and unsupported schemes. Harden _public_http_url
to fail closed when a hostname resolves to no addresses.
Yeoh Ing Ji